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Applied Nonparametric Statistical Methods, Third Edition
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Functional assessment of cell entry and receptor usage for SARS-CoV-2 and other lineage B betacoronaviruses
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A new coronavirus associated with human respiratory disease in China
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A pneumonia outbreak associated with a new coronavirus of probable bat origin
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Potential inhibitors against 2019-nCoV coronavirus M protease from clinically approved medicines
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Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding
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Potential inhibitors for 2019-nCoV coronavirus M protease from clinically approved medicines
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Therapeutic Drugs Targeting 2019-nCoV Main Protease by High-Throughput Screening
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Beware of asymptomatic transmission: Study on 2019-nCoV prevention and control measures based on extended SEIR model
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Nelfinavir was predicted to be a potential inhibitor of 2019-nCov main protease by an integrative approach combining homology modelling, molecular docking and binding free energy calculation
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Full-genome evolutionary analysis of the novel corona virus (2019-nCoV) rejects the hypothesis of emergence as a result of a recent recombination event
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Single-cell RNA expression profiling of ACE2, the putative receptor of Wuhan 2019-nCov
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Complete genome characterisation of a novel coronavirus associated with severe human respiratory disease in Wuhan, China
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Transmission dynamics of 2019 novel coronavirus (2019-nCoV)
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From SARS-CoV to Wuhan 2019-nCoV Outbreak: Similarity of Early Epidemic and Prediction of Future Trends
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A familial cluster of pneumonia associated with the 2019 novel coronavirus indicating person-to-person transmission: a study of a family cluster
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Return of the Coronavirus: 2019-nCoV
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A Novel Coronavirus from Patients with Pneumonia in China, 2019
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Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak
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Another Decade, Another Coronavirus
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Host and infectivity prediction of Wuhan 2019 novel coronavirus using deep learning algorithm
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Discovery of a novel coronavirus associated with the recent pneumonia outbreak in humans and its potential bat origin
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Functional assessment of cell entry and receptor usage for lineage B β-coronaviruses, including 2019-nCoV
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Cross‐species transmission of the newly identified coronavirus 2019‐nCoV
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Genomic and protein structure modelling analysis depicts the origin and infectivity of 2019-nCoV, a new coronavirus which caused a pneumonia outbreak in Wuhan, China
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Outbreak of pneumonia of unknown etiology in Wuhan, China: The mystery and the miracle
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The continuing 2019-nCoV epidemic threat of novel coronaviruses to global health — The latest 2019 novel coronavirus outbreak in Wuhan, China
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MLDSP-GUI: An alignment-free standalone tool with an interactive graphical user interface for DNA sequence comparison and analysis
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Coronavirus envelope protein: current knowledge
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Molecular epidemiology, evolution and phylogeny of SARS coronavirus
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Global Epidemiology of Bat Coronaviruses
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Codon stabilization coefficient as a metric to gain insights into mRNA stability and codon bias and their relationships with translation
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Origin and evolution of pathogenic coronaviruses
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ML-DSP: Machine Learning with Digital Signal Processing for ultrafast, accurate, and scalable genome classification at all taxonomic levels
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An open-source k-mer based machine learning tool for fast and accurate subtyping of HIV-1 genomes
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APOBEC3-mediated restriction of RNA virus replication
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Differential Evolution of Antiretroviral Restriction Factors in Pteropid Bats as Revealed by APOBEC3 Gene Complexity
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Evolution of Synonymous Codon Usage Bias in West African and Central African Strains of Monkeypox Virus
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Discovery of a rich gene pool of bat SARS-related coronaviruses provides new insights into the origin of SARS coronavirus
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Alignment-free sequence comparison: benefits, applications, and tools
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MoDMaps3D: an interactive webtool for the quantification and 3D visualization of interrelationships in a dataset of DNA sequences
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CG-dinucleotide suppression enables antiviral defense targeting non-self RNA
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DNA helix: the importance of being AT-rich
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Genetic diversity of coronaviruses in bats in Lao PDR and Cambodia
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Epidemiology, Genetic Recombination, and Pathogenesis of Coronaviruses
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Isolation and Characterization of a Novel Bat Coronavirus Closely Related to the Direct Progenitor of Severe Acute Respiratory Syndrome Coronavirus
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Bats and Rodents Shape Mammalian Retroviral Phylogeny
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Diversity of coronavirus in bats from Eastern Thailand
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An investigation into inter- and intragenomic variations of graphic genomic signatures
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On the biased nucleotide composition of the human coronavirus RNA genome
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Complete genome sequencing and phylogenetic analysis of dengue type 1 virus isolated from Jeddah, Saudi Arabia
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Mapping the Space of Genomic Signatures
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To sense or not to sense viral RNA — essentials of coronavirus innate immune evasion
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Identification of Diverse Alphacoronaviruses and Genomic Characterization of a Novel Severe Acute Respiratory Syndrome-Like Coronavirus from Bats in China
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Middle East Respiratory Syndrome Coronavirus Infection in Dromedary Camels in Saudi Arabia
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Genetic Characterization of Betacoronavirus Lineage C Viruses in Bats Reveals Marked Sequence Divergence in the Spike Protein of Pipistrellus Bat Coronavirus HKU5 in Japanese Pipistrelle: Implications for the Origin of the Novel Middle East Respiratory Syndrome Coronavirus
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A Case for the Ancient Origin of Coronaviruses
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Identification of diverse full-length endogenous betaretroviruses in megabats and microbats
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Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia.
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Recent Transmission of a Novel Alphacoronavirus, Bat Coronavirus HKU10, from Leschenault's Rousettes to Pomona Leaf-Nosed Bats: First Evidence of Interspecies Transmission of Coronavirus between Bats of Different Suborders
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Genomic Characterization of Severe Acute Respiratory Syndrome-Related Coronavirus in European Bats and Classification of Coronaviruses Based on Partial RNA-Dependent RNA Polymerase Gene Sequences
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Coronavirus Genomics and Bioinformatics Analysis
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Identification of SARS-like coronaviruses in horseshoe bats (Rhinolophus hipposideros) in Slovenia
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Coronavirus Diversity, Phylogeny and Interspecies Jumping
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Virus-Host Coevolution: Common Patterns of Nucleotide Motif Usage in Flaviviridae and Their Hosts
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Detection of Novel SARS-like and Other Coronaviruses in Bats from Kenya
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Molecular dynamic simulations analysis of ritronavir and lopinavir as SARS-CoV 3CLpro inhibitors
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Patterns of Evolution and Host Gene Mimicry in Influenza and Other RNA Viruses
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Rates of evolutionary change in viruses: patterns and determinants
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Structures of Two Coronavirus Main Proteases: Implications for Substrate Binding and Antiviral Drug Design
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Evolutionary Insights into the Ecology of Coronaviruses
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Nidovirus transcription: how to make sense...?
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The Correlation Coefficient: An Overview
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Coronavirus Pathogenesis and the Emerging Pathogen Severe Acute Respiratory Syndrome Coronavirus
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Bats Are Natural Reservoirs of SARS-Like Coronaviruses
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Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats.
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Genome structure and transcriptional regulation of human coronavirus NL63
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APOBEC-Mediated Editing of Viral RNA
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Isolation and Characterization of Viruses Related to the SARS Coronavirus from Animals in Southern China
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Coronavirus Main Proteinase (3CLpro) Structure: Basis for Design of Anti-SARS Drugs
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Identification of a novel coronavirus in patients with severe acute respiratory syndrome.
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A novel coronavirus associated with severe acute respiratory syndrome.
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Alignment-free sequence comparison-a review
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Rates of Molecular Evolution in RNA Viruses: A Quantitative Phylogenetic Analysis
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New insights into the mechanisms of RNA recombination.
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Generation of coronavirus spike deletion variants by high-frequency recombination at regions of predicted RNA secondary structure
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RNA recombination in animal and plant viruses.
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Chaos game representation of gene structure.
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The neighbor-joining method: a new method for reconstructing phylogenetic trees.
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Nonparametric Statistical Methods: Hollander/Nonparametric Statistical Methods
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Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis
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A statistical method for evaluating systematic relationships
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China detects large quantity of novel coronavirus at Wuhan seafood market
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Virus Taxonomy. PLOS ONE Rapid classification of novel pathogens using machine learning: COVID-19 case study
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Homologous recombination within the spike glycoprotein of the newly identified coronavirus may boost cross species transmission from snake to human
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Coronaviridae: a review of coronaviruses and toroviruses
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Virus taxonomy : eighth report of the International Committee on Taxonomy of Viruses
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Coronaviruses with special emphasis on first insights concerning SARS.
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DNA helix: the importance of being AT-rich
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Virus Taxonomy. Seventh Report of the International Committee on Taxomony of Viruses
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RNA Recombination in Animal and Plant Viruses
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Virologists weigh in on novel coronavirus in China's outbreak
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Experts: nCoV spread in China's cities could trigger global epidemic
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nCoV's relationship to bat coronaviruses & recombination signals (no snakes) -no evidence the 2019-nCoV lineage is recombinant
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2019-nCoV Global Cases by Johns Hopkins CSSE
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Supplementary Table S3: Accession IDs of sequences used in Test-1 to Test-6
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Test-3b; Source: Virus-Host-DB
